Machine Learning in Healthcare Open access Peer reviewed

A knowledge graph–driven big data framework for explainable clinical decision support using heterogeneous healthcare data

Ubaid Ul Rehman, Hufsa Mohsin, Ghulam Mustafa, Saif Ur Rehman Khan and 1 more

Journal Of Big Data | Jul 7, 2026

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A scalable, knowledge graph driven big data framework for explainable clinical decision support that unifies heterogeneous healthcare data into a semantically structured representation and provides transparent, traceable decision paths through knowledge graph reasoning addressing key challenges of interpretability and trust in clinical AI systems is proposed.

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Abstract The increasing volume and heterogeneity of healthcare data pose significant challenges for developing reliable and interpretable clinical decision support systems. Conventional machine learning approaches often struggle to integrate structured electronic health records, real-time patient inputs, and unstructured clinical narratives at scale, limiting their effectiveness in complex medical settings. This study proposes a scalable, knowledge graph driven big data framework for explainable clinical decision support that unifies heterogeneous healthcare data into a semantically structured representation. The framework integrates RDF-based semantic modeling, domain-specific natural language processing for entity extraction, and graph-based reasoning to map patient-reported symptoms to evidence-based treatment guidelines. Large-scale clinical data from the MIMIC-III database comprising over 40,000 hospital admissions real-time patient records, and international clinical protocols from the International Diabetes Federation (IDF) are incorporated to enable dynamic, data-driven decision making. Experimental evaluation demonstrates strong predictive performance in detecting critical diabetic conditions under controlled settings, achieving perfect precision and recall for hypoglycemia and a recall of 0.90 for diabetic ketoacidosis. A macro-averaged F1-score of 0.79 is achieved across all four diabetic condition classes, comparing favorably with rule-based clinical decision support systems and classical machine learning baselines while offering superior explainability. In addition to predictive accuracy, the framework provides transparent, traceable decision paths through knowledge graph reasoning addressing key challenges of interpretability and trust in clinical AI systems. The results highlight the effectiveness of knowledge graph based big data integration for scalable, explainable, and guideline-compliant clinical decision support. The proposed framework is generalizable to other data-intensive healthcare applications, offering a robust foundation for next-generation big data analytics and intelligent decision systems.

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Ubaid Ul Rehman

first | Shifa Tameer-e-Millat University

Hufsa Mohsin

middle | Shifa Tameer-e-Millat University | ORCID 0000-0001-8239-2148

Ghulam Mustafa

middle | Shifa Tameer-e-Millat University

Saif Ur Rehman Khan

middle | Shifa Tameer-e-Millat University | ORCID 0000-0002-9643-6858

Husnain Rafiq

last | Edge Hill University | ORCID 0000-0002-3178-4026

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BibTeX

@article{Rehman2026knowledge,
  title = {A knowledge graph–driven big data framework for explainable clinical decision support using heterogeneous healthcare data},
  author = {Ubaid Ul Rehman and Hufsa Mohsin and Ghulam Mustafa and Saif Ur Rehman Khan and Husnain Rafiq},
  journal = {Journal Of Big Data},
  year = {2026},
  doi = {10.1186/s40537-026-01489-3},
  url = {https://doi.org/10.1186/s40537-026-01489-3}
}

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