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Delayed recovery of nitrogen-related soil indicators during two-year phytomanagement of diesel-contaminated soil with Miscanthus × giganteus

Diana Nebeská, Hana Burdová, Kristýna Marková, Ladislav Holík and 6 more

International Biodeterioration & Biodegradation | Jul 30, 2026

Abstract

Abstract

Petroleum contamination disrupts soil nitrogen transformation pathways critical for ecosystem recovery during phytomanagement, yet their integrated response across microbial, chemical, and isotopic indicators remains poorly understood. This two-year pot experiment investigated how diesel contamination (5, 10, 25, 50 g/kg) and cultivation of the perennial grass Miscanthus × giganteus affect nitrogen availability, nitrogen-transforming microbial communities, free amino acid (FAA) profiles, and δ 15 N signatures in agricultural soil. Diesel increased soil C:N ratios up to 1.5-fold (22:1 vs. 14:1 in controls) and caused NH 4 + accumulation associated with up to 20-fold suppression of NH 3 -oxidizer gene abundance ( amoA ). Concurrently, while nitrogen fixation markers ( nifH ) increased up to 150-fold, soil δ 15 N was enriched (+3‰ at 50 g/kg), indicating that nitrogen losses associated with isotopic fractionation may have contributed more strongly to the observed isotopic signal than fixation inputs. Additionally, δ 15 N in plant biomass increased with diesel concentration, indicating uptake of isotopically enriched nitrogen. Total FAA content correlated with diesel concentration, with proline consistently elevated, reflecting a sustained stress response. M. × giganteus had a secondary, context-dependent effect, in that plant presence did not alter nitrogen-transforming microbial gene abundance or microbial activity but moderated mineral nitrogen distribution and isotopic signatures, particularly in the second season as hydrocarbon concentrations declined. These results indicate that substantial hydrocarbon removal during phytomanagement was not necessarily accompanied by recovery of multiple nitrogen-related indicators, suggesting that contaminant removal alone may not fully reflect restoration of soil functioning.

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Authors

Researchers on this paper

Diana Nebeská

first | ORCID 0000-0002-4388-5297

Hana Burdová

middle | Jan Evangelista Purkyně University in Ústí nad Labem | ORCID 0000-0001-7868-3866

Kristýna Marková

middle | Technical University of Liberec | ORCID 0000-0002-0520-3494

Ladislav Holík

middle | Mendel University in Brno | ORCID 0000-0002-2357-9487

Valerie Vranová

middle | Mendel University in Brno | ORCID 0000-0003-0931-2345

Zdeňka Kwoczynski

middle | Jan Evangelista Purkyně University in Ústí nad Labem

Jakub Trubač

middle | Charles University | ORCID 0000-0002-9470-1304

Sylvie Kříženecká

middle | Jan Evangelista Purkyně University in Ústí nad Labem | ORCID 0000-0001-9965-1011

Alena Ševců

middle | Technical University of Liberec | ORCID 0000-0001-8772-704X

Josef Trögl

last | Jan Evangelista Purkyně University in Ústí nad Labem | ORCID 0000-0003-0369-5082

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Citation

BibTeX

@article{Nebesk2026Delayed,
  title = {Delayed recovery of nitrogen-related soil indicators during two-year phytomanagement of diesel-contaminated soil with Miscanthus × giganteus},
  author = {Diana Nebeská and Hana Burdová and Kristýna Marková and Ladislav Holík and Valerie Vranová and Zdeňka Kwoczynski and Jakub Trubač and Sylvie Kříženecká and Alena Ševců and Josef Trögl},
  journal = {International Biodeterioration & Biodegradation},
  year = {2026},
  doi = {10.1016/j.ibiod.2026.106439},
  url = {https://doi.org/10.1016/j.ibiod.2026.106439}
}

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